Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSILSVKDLSHGFGDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEKLLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIGLERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRYVGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYD----SPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGE-----------HIYTGYFEQEVKETNNNTCIEEVWSEFP--SYTQYEIRAALAKCGLTT----------KHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDADAKEELKRALKEY--KGSILLISHEPDFYMDIATETWNCESWTTKVL
4F4C Chain:A ((1075-1294))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLF-DCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMN-ADCIAVVSNGTII--


General information:
TITO was launched using:
RESULT:

Template: 4F4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 948 -111901 -118.04 -585.87
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -118.04
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_4F4C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F4C-query.scw
PDB file : Tito_Scwrl_4F4C.pdb: