Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSV--TAPGIQQ-GFIFQEHRLFPWLTVEQNIAADLNLKDPK---VKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAIARALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMILVTHDIDESVYLGNELAILKAKPGKIHKL-MPIHL-AYPRNRTTPDFQAIRQRVLSEFEKTEDLEYAEGSGI
3PUW Chain:B ((17-243))-------------------VVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDA--GRVAQVGKPLELYHYPADRFVAGF-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 988 -129373 -130.94 -619.01
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -130.94
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_3PUW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUW-query.scw
PDB file : Tito_Scwrl_3PUW.pdb: