Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATGKEKNAKNPMSLLIVLMAGLFLAILNQTLLNVAM-PHLMTEFGVSATTIQWLTTGYMLVNGVLIPLSAFLITRF-GQRSLFLVAMFCFTLGTLVCGIAP-NFSTMLIGRLIQAVGGGILQPLVMTTILLIFPPE-SRGKGMGIFGLAMMFAPAVGPTLSGWIIEH--------YTWRIMFYGLVPIGAIVIIVAFFIFKNMVEPQKIKLDTLGAILSIV-------GFASLLYGVSEAGSDGWTDPIVLSTVIIGAIAIVAFVVQQLRHDDPMLDFRVFKYDIFSLSSVINIIITVALYTGMFLLPIYLQNLVGFT---------ALQSGLLLLPGAIVMLIMSPISGILFDKFGP-RPLAIIGLLVTVVTTYQYTQLTI-----DTPYTHIMLIYSIRAFGMSLLMMPVMTAGMNQLPARLNSHGTAMSNTLRQISGSIGTSLITTIYTNRTTFHYSQIADKTSTADPNFLHAFQNAVSNLMVNMNVSYDTAKTYVYSHIYKHASLDSNVMGINDAFMWATLFCVAGLILSIFLRDVRKDKLRKKKKEELSLLPAPKEAKES
4TPH Chain:A ((21-449))----------------------ELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYE--SKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYA-LMHKSLANYGSEPDTRPVNKKSLAIVLALAALSVVASAIIL-EYEDVARV---FVYAAGVAVLGIFFH-L-------ERAGLI---AALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQVFGTHLWTWSPAQFQALNPIWIMVLSPVLAW-------IAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSSWVMIWGYASYSLGELLVSGLGLAMIAR---------MMGAYFVASGISQYLGGVVANFASV-----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1788 -278087 -155.53 -766.08
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -155.53
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_4TPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TPH-query.scw
PDB file : Tito_Scwrl_4TPH.pdb: