Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAMSLDYFLSYPRLFWPKFKE-LFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLER--EVPECTAAGNNGDICGTVLKTDVVLFGDAVMHFDTLYEKL---DQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
4BV2 Chain:B ((3-239))MKEFLDLLNESRLTVTLTGAGISTPSGIPDF-----------QNV--FDIDFFYSHPEEFYRFAKEGIFPMLQA---KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLE-VPLC-------DDCNSLIRPNIVFFGENLPQ-DALREAIGLSSRASLMIVLGSSLVVYPAAELPL-ITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRV----


General information:
TITO was launched using:
RESULT:

Template: 4BV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1173 -147779 -125.98 -681.01
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -125.98
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_4BV2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BV2-query.scw
PDB file : Tito_Scwrl_4BV2.pdb: