Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDP-EQDVPYVLETIKLLVNEQ-LNVPLIGFSGAPFTLASYMIE------GGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAK-----EN--VPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSK-GITKTVQGNLDPSILLAP-WEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYSQNKKMGQYS
1R3S Chain:A ((11-366))--FPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQA------KRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCAL-YASEEEIGQLVKQMLDDFG-PHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ----


General information:
TITO was launched using:
RESULT:

Template: 1R3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1935 -247630 -127.97 -730.47
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -127.97
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_1R3S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R3S-query.scw
PDB file : Tito_Scwrl_1R3S.pdb: