Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDFSLELPVRTNKPRETGQSILIDNGYPLQFFKDAIAGASDYIDFVKFGWGTSLLTKDLEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGT---LPMTNKEKAAYIADFSD----EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA-------------------RESG-TGGICSSSG----DVRFQIVDDIISSDIDINRLIFEAPNKTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTFFL
3FLU Chain:A ((28-206))---------------------------------------------------------------------------------------EQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG--------ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE-IPNIVGVKEASGNIGSNIELINRAPEGFVV--LSGDDHTALPFMLCGGH------


General information:
TITO was launched using:
RESULT:

Template: 3FLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 658 -61311 -93.18 -414.26
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -93.18
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3FLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FLU-query.scw
PDB file : Tito_Scwrl_3FLU.pdb: