Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEHICGTSRIAGFRFSLYPMTDDFISVIKSALKKTDTSKVWTKTDHISTVLRGSIDHVFDAAKAIYLHAANSEQHIVMNGTFSIGCPGDTQGDTYLSKGDKRVNEDAVRGLKAEAPCQFALYPMNEPDYMGLIMEAVDIAKAQGTFVQGVHYASELDGDAHDVFSTLEAVFRMAEQQTNHITMTVNLSANSPSRKNRKQG
4H5B Chain:A ((2-153))---------------ETALLT---LDTLAKYLQEKEVQLDIEEN--------------------------GGQRFIRMGWRFEMGDAAVLVSVNDGPNNTSRLEITCVTQKTYADRRAEVAMMLNDRNRERAFARSID--QEGNVWLEYVGFYPTLAEMPQETFDTLFGGVLMHFQD--DYAALEGYVPQEGMQIQQPQA


General information:
TITO was launched using:
RESULT:

Template: 4H5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 648 -43349 -66.90 -285.19
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -66.90
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.073

(partial model without unconserved sides chains):
PDB file : Tito_4H5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H5B-query.scw
PDB file : Tito_Scwrl_4H5B.pdb: