Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQKTFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKSIMGVMSLGIAKGAEITISASGADENDALNALEETMKSEGLGE
1Y4Y Chain:A ((2-88))-AEKTFKVVSDSGIHARPATILVQTASKFNSEIQLEYNGKTVNLKSIMGVMSLGIPKGATIKITAEGADAAEAMAALTDTLAKEGLAE


General information:
TITO was launched using:
RESULT:

Template: 1Y4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 413 -51919 -125.71 -596.76
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -125.71
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.744

(partial model without unconserved sides chains):
PDB file : Tito_1Y4Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y4Y-query.scw
PDB file : Tito_Scwrl_1Y4Y.pdb: