Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MITMENIVRDGHPALRETAEPV--ELPPTDAEKQQLADMIEFVKNSQNPELAEKYKLRPGVGLAAPQINIKKRMIAVHAED-----ASGKLYSYALFNPKIVSHSVEKSYLTSGEGCLSVDEAIPGYVPRYARIRVKGTTLEGENIDIRLKGFPAIVFQHEIDHLNGVMFYDHIDKENPFKEPENAIAIER 1VEY Chain:B ((1-163)) --SVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAE------------GVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDTSGFW--EGCLSV-PGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLF-----------

General information: TITO was launched using: RESULT: Template: 1VEY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 776 -68442 -88.20 -438.73 target 2D structure prediction score : 0.52 Monomeric hydrophicity matching model chain B : 0.80 3D Compatibility (PKB) : -88.20 2D Compatibility (Sec. Struct. Predict.) : 0.52 1D Compatibility (Hydrophobicity) : 0.80 QMean score : 0.436

(partial model without unconserved sides chains): PDB file : Tito_1VEY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1VEY-query.scw PDB file : Tito_Scwrl_1VEY.pdb: