Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------MKKMRKRSFHELVMENKKELMTNTEYLNQLEEKLEQRFKQK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1HZ4 Chain:A ((3-368))EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREIN


General information:
TITO was launched using:
RESULT:

Template: 1HZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 83 4054 48.84 98.87
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : 48.84
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.060

(partial model without unconserved sides chains):
PDB file : Tito_1HZ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HZ4-query.scw
PDB file : Tito_Scwrl_1HZ4.pdb: