Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKRKGCFAAAGFMMIFVFVIASFLLVLLFFNRDLIKKLPIDTKTIVLERLTDYKPLVEEELESQGLSNYTSLILGMMYQESKGKGN---------DPMQSSESLG--------L---KRNEITDPQLSVKQGIKQFTLMYKTGKEKGVDLDTIIQSYNMGAGYIDFVAEHGGTHTEELAKQYSEQQVKKNPDLYTCGGNAKNFRYPYCYGDYTYAEKVKEKTKTVEESLQVATLETMESKAHE
3W6B Chain:A ((32-148))-----------------------------------------VTKPAEVPSRIWTYVMNADNAYGKGGDFA--LLLSAVIKKESYFGDGLSGSPSAGDGLMQVEPNTRNAYLSQFSAKYGHAYNHSSEQDQVYMGSLILNEKIVRF---G-SIYSGLLHYNGGDY---------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 397 -4843 -12.20 -49.92
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -12.20
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_3W6B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W6B-query.scw
PDB file : Tito_Scwrl_3W6B.pdb: