Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKNHFTFQKLNGITPYIWTIFFILPFYFIWKSSSTFVIIVGIILTLLFFSVYRFAFVSKGWTIYLWGFLLIGISTASITLFSYIYFAFFIAYFIGNIKERVPFHILYYVHLISAAVAANFSLVLKKEFFLTQIPFVVITLISAILLPFSIKSRKERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMK-----------GIRLKDELINIKQI----LEAA-DIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQA---------KTCRVDIQQLWKEVVITVSDDGTFKGEEN------------SFSKGHGLLGMRERLEFANGSLHI-DT-ENGTKLTMAIPNNSK
4E01 Chain:A ((146-404))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIE-DEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA--GFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHID-


General information:
TITO was launched using:
RESULT:

Template: 4E01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 603 -1436 -2.38 -7.48
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.49

3D Compatibility (PKB) : -2.38
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_4E01.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E01-query.scw
PDB file : Tito_Scwrl_4E01.pdb: