Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDYSQFPRKNILCVDMKSFYASVSAVTMGLNPLTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRLFEIPEDP-RIHIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSIDESFLDAGK------EDPEEMAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESKKTKSGIARWRYEDVPNKLWKVRPLSKMWGIGGRMERNLNRMGISTIGQLAKFPLELLEKKFGI-MGNQLYYHAHGIDLSEIGAPLMQGQISFGKSQILLRDYTRSEEIKAVLLEICEEVARRARTHNKVGRTISLGIGYSKDELGGGFHRSKTIDLPTSITMDIYRCCLMLFNKFYS--GKTVRSVSVTLSNIEDDVNQQLSLFEVDNEKRRKLGFVMDGIRSKYGSKAILRAVSYTPAGTALQRAGLTGGHKS
4F50 Chain:A ((2-342))----------IVIFVDFDYFFAQVEEVLN-PQYKGKPLVVCVYS---SGAVATANYEARK-LGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHAD--KIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKP---NGLGVIRPTEVQDFLNE-LDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVENK--S-KIPHGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKR--IPKAIHVVAVTEDL---DIVSRGRTFPHGISK-ETAYSESVKLLQKILEEDERKIRRIGVRFSKFI------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4F50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1505 -22625 -15.03 -69.40
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -15.03
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_4F50.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F50-query.scw
PDB file : Tito_Scwrl_4F50.pdb: