Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGEAIVITSGKGGVGKTTTSANLGTALAILGKRVCLVDTDIGLRNLDVVMGLENRIIYDLVDVVEGRCKMHQALVKDKRFDDLLYL---MPAAQTSDKTAVAPEQIKNMVQELKQEFDYVIIDCPAGIEQGYKNAVSGADKAIVVTTPEISAVRDADRIIGLLEQEENIEPPRLVVNRIRNHLMKNGDTMDIDEIVQHLS-------IDLLGIVADDDEVIKASNHGEP-IAMDPKNRASIAYRNIARRILGESVPLQVLEEQNKGMMAKIKSFFGVRS
4RZ3 Chain:B ((33-269))----IAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMAIGMGNIDILLGESSSLA--LADWFSARLPLSE-LVKSGP-EHLSYIAGGTGAAQWQGLDTASIDRFLTELQAVASQYDYLIFDMGAGASGERLYFLKSVDDVFVVTTPEPTAMTDAYAMMKYMHAAGSEAPFSVIVNRAG----KEREGYEVFERLKHVTGRFLNKDIALLGIIPEDRTVARAVVSQTPFVLLDPAAKASKAVRQMAFR------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1183 -39505 -33.39 -174.80
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -33.39
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_4RZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RZ3-query.scw
PDB file : Tito_Scwrl_4RZ3.pdb: