Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGK----AQEMTGKETRIYPVIRSTSFPDK------SSEDIPLIYD--DHTAETRIYYALDLGKTYRLID--QRMLEKENWTKERIRETAAFNLRSLPTVVKEDTVAGNY------------FYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGTVPITAL----------------------------SFLYN------EGKLEPVFILAKSRPKKD----------------------
4CG4 Chain:A ((2-377))SEVALEHKKKIQKQLEHLKKLRKSGEEQRSYGEEKAVSFLKQTEALKQRVQRKLEQVYYFLEQQEHFFVASLEDVGQMVGQIRKAYDTRVSQDIALLDALIGELEAKECQSEWELLQDIGDILHRAKTVPVPEKWTTPQEIKQKIQLLHQKSEFVEKSTKYFSETLRSEMEMFNVPELIGAQAHAVNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVGDKTAWILGACKTSISRKGNMTLS---PENGYWVVIMMKENEYQASSVPPTRLLIKEPPKRVGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGTRDGGKNTAPLTICPVGGQGPDALEVLFQ


General information:
TITO was launched using:
RESULT:

Template: 4CG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 431 6432 14.92 24.18
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 14.92
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.114

(partial model without unconserved sides chains):
PDB file : Tito_4CG4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CG4-query.scw
PDB file : Tito_Scwrl_4CG4.pdb: