Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------MKKIVGALAVFVITYALFSAAGYLFPVDQ---------EWYNSLKKPDWTPSGTAIGII--WAI------LFALISLSAAIV-------YAAFSFK-GAKSFWFTLLINYVLNQAFSYFQFTQKNLLAA-----------SLDCLLVAITAIVLLIIAKKYSRAASYLLLPY-FLWSAFATFLSFTINSMNL
3EPZ Chain:A ((18-267))GPKCIQCGQYLDDPDLKYGQHPPDAVDEPQMLTNEKLSIFDALPQHKLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIPGGVNGKNLGPINEWWITGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGDQPIFLTPCMRDLIKLAGVTLGQRRAQA-


General information:
TITO was launched using:
RESULT:

Template: 3EPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 689 -62281 -90.39 -404.42
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -90.39
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_3EPZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EPZ-query.scw
PDB file : Tito_Scwrl_3EPZ.pdb: