Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIVSILFMFGLVMGFSQFQPSTVFAADKVVHETIIVPKNTTYDGKGQRFVAGKELGDGSQSENQDPVFRVEDGATLKNVVLGAPAADGVHTYGNVNIQNVKWEDVGEDALTVKKEGKVTIDGGSAQKASDKIFQINKASTFTVKNFTADNGGKFIRQLGGSTFHVDVIIDKCTITNMKEAIFRTDSKTSTVRMTNTRYSNVGQKWIGVQHIYENNNTQF
4YZA Chain:B ((18-189))------------------------------VITDTIIVKSGQTYDGKGIKIIA-QGMGDGSQSENQKPIFKLEKGANLKNVIIGAPGCDGIHCYGDNVVENVVWEDVGEDALTVKSEGVVEVIGGSAKEAADAVFALNAPCTFKVKNFTATNIGKLVRQNGNTTFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYHNLNVNNC------------------


General information:
TITO was launched using:
RESULT:

Template: 4YZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1100 -97643 -88.77 -567.69
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -88.77
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_4YZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YZA-query.scw
PDB file : Tito_Scwrl_4YZA.pdb: