Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKPTKLFSTLALAAGMTAAAAGGAGTIHAQQPETTVSIDDLYSYPIDSYLVSAEALNVRTKPSASSQKADTLHLGDSLKLISFSNADWAKVKYKNGKTGFVSTHYIVKAATTVKTKTKTKVYTSADGKSIKTLPADTSVSFLGWSKTNKGGFDFDWVFVDYGGTTGYMKTKDLHMTK
2JMA Chain:A ((24-60))-----------------------------------------------------------------------TMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKK---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 96 -15210 -158.44 -411.08
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -158.44
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.762

(partial model without unconserved sides chains):
PDB file : Tito_2JMA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JMA-query.scw
PDB file : Tito_Scwrl_2JMA.pdb: