Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREEEKKTSQVKKLQQFFRKRWVFPAIYLVSAAVILTAVLWYQSVSNDEVKDQLADNGGNSAYDNNDDAVEVGKSMENVAMPVVDSENVSVVKKFYETDAAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAEKDPVLGYVVEVEHADGLSTVYQSLSEVSVEQGDKVKQNQVIGKSGKNLYSEDSGNHVHFEIRKDGVAMNPLNFMDKPVSSIEKAATQETEESIQQSSEKKDGSTEKGTEEKSGEKKDDSTDKSGSKESSTTEDTEQS
4BH5 Chain:A ((16-141))-------------------------------------------------------------------------APRGQAFWPVRG----PTLHRYGEQL--------------QGELRWKGMVIGASEGT--EVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGG--QGRPSLYFEIRRQGQAVNPQPWLG--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4BH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 668 -52125 -78.03 -413.69
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -78.03
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_4BH5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BH5-query.scw
PDB file : Tito_Scwrl_4BH5.pdb: