Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATI---GAFVYNLITDLIGGIEVTLADRD |
1MV3 Chain:A ((270-482)) | ----------------------DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLF--EDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQA------QHDYTATDT-----------------------------------------------DELQLKAGDVVLVIPFQNPEEQDEG------WLMGVKESDWNQHKKLEKCRGVFPENFTERVP----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10927 for 866 contacts (-12.6/contact) +
2D Compatibility (PS) -19943 + (NN) 13868 + (LL) 6656
1D Compatibility (HY) 5200 + (ID) 1300
Total energy: -6446.0 ( -7.44 by residue)
QMean score : 0.266
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