Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSE-----QPVLIGRADDSTLVLTDDYASTRHARLSMRG--SEWYVEDLGSTNGTYLDRAKVTT----------AVRVPIGTPVRIGKTAIELRP
1MZK Chain:A ((179-291))
----------------------------------------------------------SSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYV-
General information:
TITO was launched using:
RESULT:
Template:
1MZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56965 for 768 contacts (-74.2/contact) +
2D Compatibility (PS) -10256 + (NN) -1346 + (LL) 5728
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -68889.0 ( -89.70 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1MZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZK-query.scw
PDB file :
Tito_Scwrl_1MZK.pdb
: