Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAK-------LAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVM-VDLDADPEVLA--AAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN
2GZO Chain:A ((2-187))
-----------------ESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQMDLPTEQVSADLAMGSQVLMGGPVSQDRGFVLHTSQPY--WA---NSTELGSGLMLTTSRD-VLTAIGSKRSPDKFLVALGYAGWSKNQLEQELADNSWLTIPADHALLFDINHEDRWQQASRSLGFEAWQLSTQAGHA---
General information:
TITO was launched using:
RESULT:
Template:
2GZO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93070 for 1226 contacts (-75.9/contact) +
2D Compatibility (PS) -18839 + (NN) -3507 + (LL) 1096
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -124470.0 ( -101.53 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_2GZO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZO-query.scw
PDB file :
Tito_Scwrl_2GZO.pdb
: