Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLVRPDLPVRIGVQLQPQH------APHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFG-TAGSRLDDLAAALPRIKARLGKL-------------------------NPPPTR--DIPVLIGGGG--ERKTLRLVAEYADIWHSFT-AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR |
| 4UWM Chain:A ((1-255)) | --------MAMETGLIFHPYMRPGRSARQTFDWGIKSAVQADSVGIDSMMISEHASQIW----ENIPNPELLIAAAALQTKNIKFAPMAHLLPHQHPAKLATMIGWLSQILEGRYFLGIGAGAYPQASYMHGIRNAG-TKNLNDMVRESLFIMEKIWKREPFFHEGKYWDAGYPEELEDEQHKLADFSPWGGKAPEIAVTGFSYNSP-SMRLAGERNFKPVSIFSGLDALKRHWEVYSEAAIEAGHTPDRSRHAV---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84505 for 1584 contacts (-53.3/contact) +
2D Compatibility (PS) -22016 + (NN) -10977 + (LL) 2360
1D Compatibility (HY) -2400 + (ID) 1850
Total energy: -119388.0 ( -75.37 by residue)
QMean score : 0.477
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