Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQADEIRRARETKSVRDLEHANEIKAAIEALGPIALPVKTSADSGKLFGSVTAADVVAAIKKAGGPNLDKRIVRLPKTHIKAVGTHFVSVHLHPEIDVEVSLDVVAQS
1DIV Chain:A ((1-148))
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKL-TVTIPAKA-GEGGRLFGSITSKQIAESLQAQHGLKLDKRKIELA-DAIRALGYTNVPVKLHPEVTATLKVHVTEQ-
General information:
TITO was launched using:
RESULT:
Template:
1DIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103308 for 960 contacts (-107.6/contact) +
2D Compatibility (PS) -16648 + (NN) -7531 + (LL) -164
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -139351.0 ( -145.16 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1DIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DIV-query.scw
PDB file :
Tito_Scwrl_1DIV.pdb
: