Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAA----RNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTG-AAQAAGAMPVLTLYGIPHRDCGSYASGGFA-----TGTDYRGWIDAVASGL---GSSPATIIVEPDALAMADC------LSPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLSAE--------AMAARLNDVG-VGRARGFSLNVSNFYTTD--------------EEIGYGEAISGL----TN-GSHYVIDTSRNGAGPAPD-APLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGR----------------GEPQAGRFVSQYAIDLAHNAGQ |
| 4AU0 Chain:A ((3-360)) | ------------------------------------------------------------------------------------TYSGNPFVGVTPWANAYYASEVSSLAIPSLTGAMATAAAAVAKVPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQFVVYDLPDRDCAALASNGEYSIADGGVAKYKNYIDTIRQIVVEYSDIRTLLVIEPASLANLVTNLGTPKCAN-AQSAYLECINYAVTQLN-LPNVAMYLDAGHAGWLGWPANQDPAAQLFANVYKNASSPRALRGLATNVANYNGWNITSPPSYTQGNAVYNEKLYIHAIGPLLANHGWSNAFFITDQGRSGKQPTGQQQWGDWCNVIGTGFGIRPSANTGDSLLDSFVWVKPGGECDGTSDSSAPRFDSHCALPDALQPAPQAGAWFQAYFVQLLTNANP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64799 for 2507 contacts (-25.8/contact) +
2D Compatibility (PS) -31426 + (NN) -14493 + (LL) 6992
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -123676.0 ( -49.33 by residue)
QMean score : 0.469
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