Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRSGAAGPFL-GSIPFP-DVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGPGMPRVSEGRSPSKPDEVAA-SSTMGRHLGDTVEVGARRLRVVGIVPNSTALAKIPNVFLTTEGLQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALVIALLAAVVGVVLAQVLAPLFPMIVAVPVGAYLALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP |
| 3L09 Chain:A ((6-255)) | SDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVE------------------------RMGLQPQAMRVALHRLKRD---------GWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPD---TLSATPISRRFALICGPLED------------VPEDWLLTAPSGRGLPVWVQDVVVEAGCEAEFKALERTLA----------------------------------------QIDKVPDTRLERFTLRVLVLHAWRRLI------LRSSPAAEAALGG--ARAEISCRARVHQLLDQLGSVEPD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144814 for 1780 contacts (-81.4/contact) +
2D Compatibility (PS) -25425 + (NN) -5884 + (LL) 9236
1D Compatibility (HY) -800 + (ID) 1500
Total energy: -169187.0 ( -95.05 by residue)
QMean score : 0.184
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