Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAVESTLRRVAKDLTGLRQRWALVGGFAVSA-RSEPRFTRDVDIVVAVANDDAAESLVRQLLTQQYHLLASVEQDAARRLAAVRLGATA---DTAANVVVDLLFASCGIEPEIAEAAEEIEILPDLVAPVATTAHLIAMKLLARDD----DRRPQDRSDLRALVDAAS-PQDIQDARKAIELITLRGFHRDRDLAAEWTRLAAKW
4OK0 Chain:A ((23-184))
-------MRAIVKNLA--DTPMVLKGETALYLGYGLNRFSEDLDFDCHKKI-NLLGRVKSAIPN-GIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKES-------EVN--VIEGMRIAKIERIIDNKLCACFDGEHTRTKARDLFDLHFLAKHYEEHFNLD-LASRLKD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4OK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54265 for 1086 contacts (-50.0/contact) +
2D Compatibility (PS) -16169 + (NN) -3381 + (LL) 4036
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -76529.0 ( -70.47 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_4OK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OK0-query.scw
PDB file :
Tito_Scwrl_4OK0.pdb
: