Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVR-PAANTRSIDDLPLTRFHGDVFDTATVAEAM--AGCDDVYYCVVDTRAWL--RDPSPLFRTNVAGLRNVLDVATDAS-LRRFVFTSSYATVGRRR--GHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAV----FGRLPFT-M---RGIRLEAVGVDDAARALILAAERGRNGERYLISER-MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR-PVEESIREAARFWAAMRTVGKDPAAS |
| 2PK3 Chain:A ((13-320)) | --MRALITGVAGFVGKYLANHLTE----QNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL--RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRD-FTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDT-ELNPL-Q------------L---RP---S-----EVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152727 for 2466 contacts (-61.9/contact) +
2D Compatibility (PS) -31088 + (NN) -6473 + (LL) 2840
1D Compatibility (HY) -4400 + (ID) 3150
Total energy: -194998.0 ( -79.07 by residue)
QMean score : 0.561
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