Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTHDDTWDIKTSVGATAVMVAAARAVETDRPDPLIRDPYARLLVTNAGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFASAVAAGIRQVVILASGLDSRAYRLDWPAGTIVYEIDQ-PKVLSYKSTTLAENGVTPSAGRREVPADLRQDWPAALRDAGFDPTARTAWLAEGLLMYLPAEAQDRLFTQVGAVSVAGSRIAAETAPVHGEERRAEMRARFKKVADVLGIEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDEMRRVGRWVEGVPMADDPTAFAEFVTAERL |
| 1XTP Chain:A ((82-235)) | ------------------------------------------------------------------------------------------SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETA---TL-----PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCS--DRF----------LV--------DKEDSSLTRSD--IHYKRLFNESGVRVVKE---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -60450 for 1165 contacts (-51.9/contact) +
2D Compatibility (PS) -15353 + (NN) 399 + (LL) 12084
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -67370.0 ( -57.83 by residue)
QMean score : 0.333
|
|
|