Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPKRSSDLFSQVVNSGPGSFLARQLGVPQPETLRRYRAGEPPLTGSLLIGGAGRVVEPLRAALEKDYDLVGNNLGGRWADSFGGLVFDATGITEPAGLKGLHEFFTPVLRNLGRCGRVVVVGGTPEAAASTNERIAQRALEGFTRSLGKELRRGATTALVYLSPDAKPAATGLESTMRFLLSAKSAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-ESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAI-------PLATREVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA |
4WK6 Chain:D ((10-246)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-NGKGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAGIT---LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVAS---------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRL-------GDPREIASAVAFLASPEAAYITGETLHVNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131391 for 1812 contacts (-72.5/contact) +
2D Compatibility (PS) -22900 + (NN) -3425 + (LL) 11684
1D Compatibility (HY) -18400 + (ID) 4700
Total energy: -169132.0 ( -93.34 by residue)
QMean score : 0.512
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