Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL-TDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGE-I----ARREFREPPL----SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
3I8O Chain:A ((3-133))
--AKKVCVDTCVVIDGRITELIERGK---LKDATIIIPEAVVSELEYQANMGREIGYKGIEELRK-LIEKASEHNIKVEYYGE---RPTREEIF-------LAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAA----
General information:
TITO was launched using:
RESULT:
Template:
3I8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24824 for 903 contacts (-27.5/contact) +
2D Compatibility (PS) -12997 + (NN) -1754 + (LL) 992
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -41083.0 ( -45.50 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3I8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I8O-query.scw
PDB file :
Tito_Scwrl_3I8O.pdb
: