Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVC--DPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD |
5DD8 Chain:A ((54-141)) | ------------------LGREIERTYAASGLNAAGWDLLLTLYRSAPPEG-LRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVT------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41516 for 523 contacts (-79.4/contact) +
2D Compatibility (PS) -8607 + (NN) -3632 + (LL) 5576
1D Compatibility (HY) 800 + (ID) 750
Total energy: -48129.0 ( -92.02 by residue)
QMean score : 0.202
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