Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQ--LKTVDAVGTMDEVFARALRALGK
4IKE Chain:B ((1-203))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVF--PKHGN-VIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIG-
General information:
TITO was launched using:
RESULT:
Template:
4IKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72214 for 1358 contacts (-53.2/contact) +
2D Compatibility (PS) -19571 + (NN) -13260 + (LL) -268
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -128863.0 ( -94.89 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_4IKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IKE-query.scw
PDB file :
Tito_Scwrl_4IKE.pdb
: