Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARQVFDDKLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPPGMR
2I02 Chain:A ((6-137))
TDRTQEIQKLHELIKNIDYGMFTTVDDDGSLHSYPMSKSGD--EATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQQRYVSISGTSQLVKDRN-----KMRELWKPELQT------WFPK--GLDEPDIALLKVNINQVNYWDS---
General information:
TITO was launched using:
RESULT:
Template:
2I02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53833 for 878 contacts (-61.3/contact) +
2D Compatibility (PS) -14343 + (NN) -6218 + (LL) 108
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -77736.0 ( -88.54 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_2I02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I02-query.scw
PDB file :
Tito_Scwrl_2I02.pdb
: