Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITSHAYQDAFAAARDT--EITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
2DWU Chain:B ((10-257))
-------IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMYEKALHEL-DTYLKVHSHACPTLATVVENRLEDTAYVTQQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGIL-ADNLNPKHRFF-TTGSVSSFEHIAERWLG---------------
General information:
TITO was launched using:
RESULT:
Template:
2DWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -226482 for 2202 contacts (-102.9/contact) +
2D Compatibility (PS) -27076 + (NN) -10560 + (LL) 916
1D Compatibility (HY) -23600 + (ID) 5350
Total energy: -292152.0 ( -132.68 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_2DWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DWU-query.scw
PDB file :
Tito_Scwrl_2DWU.pdb
: