Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHAIEVTETGGPGVLR-HVDQPQPQPGHGELLIKAEAIGVNFIDTYFRSGQYPRE--LPFVIGSEVCGTVEAVGPGVTAADTAISVGDRVVSASA-NGAYAEFCTAPASLTAKVPDDVTSEVAASALLKGLTAHYLLKSVYPVKRGDTVLVHAGAGGVGLILTQWATHLGVRVITTVSTAEKAKLSKDAGADVVLDYPEDAWQFAGRVRELTGGTGVQAVYDGVGATTFDASLASLAVRGTLALFGAASGPVPPVDPQRLNAAGSVYLTRPSLFHFTRTGEEFSWRAAELFDAIGSEAITVAVGGRYPLADALRAHQD-LEARKTVGSVVLLP |
| 1YB5 Chain:B ((30-350)) | MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA----FKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG-SRGTI-EINPRDTMAKESSII---GVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214769 for 2850 contacts (-75.4/contact) +
2D Compatibility (PS) -34126 + (NN) -11894 + (LL) 208
1D Compatibility (HY) -18400 + (ID) 5150
Total energy: -284131.0 ( -99.70 by residue)
QMean score : 0.570
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