Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
3OQT Chain:C ((1-70))
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
General information:
TITO was launched using:
RESULT:
Template:
3OQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35010 for 431 contacts (-81.2/contact) +
2D Compatibility (PS) -7765 + (NN) -2602 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3500
Total energy: -58477.0 ( -135.68 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3OQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OQT-query.scw
PDB file :
Tito_Scwrl_3OQT.pdb
: