Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVG-------AATALAVACVYTVIYLAARDLPPACFSIFAVFW------GALGIATGATHGLLQETTREVRWVRSTQ-----------IVAGHRTHP----------LRVAGMIGTVAAVVIAGSSP--------LWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALA--GVDRWTQYG---SLMVTDAVIRLAVAAAAVVI--GWGLAGYLWAATAG--------AVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIAHFVDRRTQRLR----ALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAI----AMLTLTGA--------AAVAAALHRAYLLGWVSATVASTLLLLLPMPLE----------TRTVIALLFGPTVGIAIHVAALARRPD |
| 2OCC Chain:A ((1-514)) | MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHM-------FTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309909 for 3423 contacts (-90.5/contact) +
2D Compatibility (PS) -44055 + (NN) -11558 + (LL) -32
1D Compatibility (HY) -19200 + (ID) 3350
Total energy: -388104.0 ( -113.38 by residue)
QMean score : 0.126
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