Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEIWRGVTSEGAEARWYSEAQEVSDDSPALAQPAVPNYRGSCWIPFSIELEGDAASFVGEIGKILADSVEQLQAAAFVNGSGNGEPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQASAAFAANLSTINTLRQAETSNGALKF-PSLHDSPPMLAGKSVLEVSHMDTVDSAVTATNHPLVLGDWKQ-FLIGDRVGSMVELVPHLFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
1OHG Chain:A ((1-281)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLGSDADSAGSLIQPMQIPGIIMPGLRRLTIRDLLAQGRTSSNALEYVREEVFTNNADVVAEKALKPESDITFSKQTANVKTIAHWVQASRQVMDDAPMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVATAYDTSLNATGDT--RADIIAHAIYQVTESEFSASGIVLNPRDWHNIALLKDNEGRYIFGGPQAFTSNIMWGLPVVPTKAQA---------AGTFTVGGFDMASQVWDRMDATVEVSRE--DRDNFVKNMLTILCEERLALAHYRPTAIIKGTFSSG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49202 for 2146 contacts (-22.9/contact) +
2D Compatibility (PS) -29792 + (NN) -9632 + (LL) 12852
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -78574.0 ( -36.61 by residue)
QMean score : 0.225
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