Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAARKCGAPPIAADGSTRRPDCVTAVRTQARAPTQHYAESVARRQRVLTITAWLAVVVTGSFALMQLATGAGGWYIALINVFTAVTFAIVPLLHRFGGLVAPLTFIGTAYVAIFAIGWDVGTDAGAQFFFLVAAALVVLLVGIEHTALAVGLAAVAAGLVIALEFLVPPDTGLQPPWAMSVSFVLTTVSACGVAVATVWFALRDTARAEAVMEAEHDRSEALLANMLPASIAERLKEPERNIIADKYDEASVLFADIVGF----TERASSTAPADLVRFLDRLYSAFDELVDQ---HGLEKIKVSGDSYMVVSGVPR-PRPDHTQ-------ALADFALDMTNVAAQLKDPRGNPVPLRVGLATGPVVAGVVGSRRFFYDVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD-DFVLRERGHINVKGKGVMRTWYLIGRKVAADPGEVRGAEPRTAGV |
| 3G82 Chain:B ((10-206)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAI-------RQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108655 for 1272 contacts (-85.4/contact) +
2D Compatibility (PS) -19024 + (NN) -11165 + (LL) 22792
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -135302.0 ( -106.37 by residue)
QMean score : 0.578
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