Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAHRSVLLVVHTGRDEATETARRVEKVLGDN--KIALRVLSAEAVDRGSLHLAPDDMRA-MG----VE-IEVVDADQHAADGCELVLVLGGDGTFLRAAELARN-ASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGR-IVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEAD------GHDALVFCDGRREMLIPAGSRLEVTRCV-------TSVKW-------ARLDSAPFTDRLVRKFRLPVTGWRGK |
| 3AFO Chain:A ((40-377)) | --PLQNVYITKKPWTPSTREAMVEFITHLHESYPEVNVIVQPDVAEE-----ISQ-DFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVISSRAKCLHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDIFIDGEFLTRTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPICPRSLSFRPLILPHSSHIRIKIGSKLNQKPVNSVVKLSVDGIPQQDLDVGDEIYVINEVGTIYIDGT----KRSGIYCVAKTENDWIRGINELLGFNSS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173173 for 2326 contacts (-74.5/contact) +
2D Compatibility (PS) -31981 + (NN) -14393 + (LL) 664
1D Compatibility (HY) -14000 + (ID) 3400
Total energy: -236283.0 ( -101.58 by residue)
QMean score : 0.449
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