Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEILRGGRSRLVFGTLAILLCLVLGVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALES---AQARLAALSILVGAVGATGPGVMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIGDPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK |
4BIW Chain:B ((184-235)) | ------------------------------------------------------------------------------------------------------------------------------------LYGNPNALESALENIVRNALRYSHTKIEVG-FAVDKDGITITVDDDGPGVSPE-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9424 for 207 contacts (-45.5/contact) +
2D Compatibility (PS) -5606 + (NN) -5400 + (LL) 16800
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -7430.0 ( -35.89 by residue)
QMean score : 0.280
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