Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVR-DGQLTIKAERTEQKDFDGRSEFAYGSFVRTVSLPVGADED-DIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
4YL9 Chain:A ((22-121))
-----------------------------------ESVIPPIDMYEEGGELVVVADLAGFN-KDKISVRLSAQNELIINAEREIQYIGTKYATQRPLKIHKVIRLPVKVKRDSQVTAKYENGVLTIRIPVEGSVSI----------
General information:
TITO was launched using:
RESULT:
Template:
4YL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43313 for 585 contacts (-74.0/contact) +
2D Compatibility (PS) -10639 + (NN) -3498 + (LL) 2988
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -61512.0 ( -105.15 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_4YL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YL9-query.scw
PDB file :
Tito_Scwrl_4YL9.pdb
: