Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRPRTDAIHHHVVVNAPIERAFAVFTTR--FGDFKPREHNLLAIPITETVFECHAGGHIYDRGVDG----------------SVCKWARVLVYEPPSRVLFTWDIGPTWRPETDLAKTSEVEVRFTAQSAETTRVDLEHRHLDRHGPGWESVADGVDSEAGWPLYLRRYTDLLCIQVQP
2K5G Chain:A ((15-165))
--RLDAQSIRFERLLPGPIERVWAWLADADKRARWLAG-G----------ELPRQPGQTFELHFNHAALTAETAPARYAQYDRPIVARHTLLRCEPPRVLALTWGGGA-------GEAPSEVLFELSEAG-EQVRLVLTHTRLADRA-----AMLDV--AGGWHAHLAVLAGKLAGQAP-
General information:
TITO was launched using:
RESULT:
Template:
2K5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48814 for 906 contacts (-53.9/contact) +
2D Compatibility (PS) -14290 + (NN) -2485 + (LL) 1324
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -70115.0 ( -77.39 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_2K5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5G-query.scw
PDB file :
Tito_Scwrl_2K5G.pdb
: