Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDYLRDAAEIYRRSFAVIRAEADLARFPADVARV-----VVRLIHTCGQVDVAEHVAYTDDVVARAGAALAA---------GAPVLCDSSMVAAGITTSRLPADNQIVSLVADPRATELAARRQTTRSAAGVELCAERLPGAVLAIGNAPTALFRLLELV--------DEGAPPPAAVLGGPVGFV---GSAQAKEELIERPRGMSYLVV--------------------------------------RGRRGGSAMAAAAVNAIASDRE---------------- |
1FGS Chain:? ((1-314)) | -MNYTETVAYIHSFP----RLAGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGDSTNVITPVVSVLTEVALDTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84621 for 1571 contacts (-53.9/contact) +
2D Compatibility (PS) -21762 + (NN) -2418 + (LL) 880
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -116021.0 ( -73.85 by residue)
QMean score : 0.144
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