Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAPPSPTASCDVISPVAIPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHRTARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQLDIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVLPQIANWLNAPGHTEEVILLYLEDQLKNASAYESVVATLDQVLRRADGTSLIYRPNPARRATNGCVPLPLDVSREEIRASGARAVLVGSCAPGWSAAVFDWSGVELESGSNSGYRPYPACDATYGRGVYAWRLVRYYEDSTLATALANPTRPPANPQALTPPKVPAMTDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRA-GAGACALQG--ADGRWVAASCGDPHPAACRDA-A-----G--------RWTVTPAPVVFAGAALACTAIGADFTLPRTGNQNARLHAVAGP-AGGAWVHYLLPP |
| 5AO5 Chain:A ((288-417)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYLNWESDQPDNPSEENCGVIRTESSGGWQNRDCSIALPYVCKKKP-KVECEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQEVEELWIGLNDL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23772 for 481 contacts (-49.4/contact) +
2D Compatibility (PS) -10528 + (NN) -4641 + (LL) 23972
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -18869.0 ( -39.23 by residue)
QMean score : 0.220
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