Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATQSPPEPAPDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRASSGGIPVATSMWRDAQTVRTYGPAVAKALALRVAGKARSRLTGRHCRKFMQLTDFDPFDPAIAADPYPHYRELLAGERVQYN--PKRDVYILSRYADVREAARNHDTLSSARGV--TFSRGWLPFLPT-----SDPPAHTRMRKQLAPGMARGALETWRPMVDQLARELVGGLLTQTPADVVSTVAAPMPMRAITSVLGVDGPDEAAFCRLSNQAVRITDV-ALSASGLISLVQGFAGFRRLRALFTHRR---DNGLLRECTVLGKLATHAEQGRLSDDELFFFAVLLLVAGYESTAHMISTLFLTLADYPDQLTLLAQQPDLIPSAIEEHLRFISPI-QNICRTTRVDYSVGQAVIPAGSLVLLAWGAANRDPRQYEDPDVFRADRNPVGHLAFGSGIHLCPGTQLARMEGQAILREIVANIDRIEV-----VEPPTWTTNANLRGLTRLRVAVTPRVAP |
| 3A50 Chain:B ((12-403)) | ------------------------------------------------------------------------------------------------------DLFSGTFWQNPHPAYAALRAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHRLPEDQRADMPATPTPMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGLPAEDRDDFSAWSS--VLVDDSPADDKNAAMGKLHGY-----LSDLLERKRTEPDDALLSSLLAVSDM----DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFA--DRPELALAVGLDELVYRRSTLVRGLSRMPVTMGPRSA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215078 for 3008 contacts (-71.5/contact) +
2D Compatibility (PS) -40486 + (NN) -27827 + (LL) 6760
1D Compatibility (HY) -26400 + (ID) 6800
Total energy: -309831.0 ( -103.00 by residue)
QMean score : 0.457
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