Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANAHG--------QKVQAAGNNMAQTDSAVGSSWA------
3R66 Chain:A ((7-102))
-TTQIEVGP-GATNATINFEAGILECYERFS----------WQRALDYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLFMDPSAGIEGFEP
General information:
TITO was launched using:
RESULT:
Template:
3R66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7374 for 441 contacts (-16.7/contact) +
2D Compatibility (PS) -9313 + (NN) -6430 + (LL) 1156
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -24511.0 ( -55.58 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_3R66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R66-query.scw
PDB file :
Tito_Scwrl_3R66.pdb
: