Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKAPQKSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMSLAILNE-----------NRDDLPEQYREGMARAWGP--------------------VRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGLPAELAKAATSDAYDNALRKSHHAGMDAVGED--VGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD |
| 1R4W Chain:A ((2-222)) | ----GPAPRVLELFYDVLSPYSWLGFEVLCRYQHLWNIKLKLRPALLAGIMKDSGNQPPAMVPHKGQYILKEIPLLKQLFQVPMSVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKYGAFGLPTTVAHV--------------DGKTYMLFGSDRMELLAYLLGEKWMGPVPPTL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71502 for 1466 contacts (-48.8/contact) +
2D Compatibility (PS) -20127 + (NN) -7316 + (LL) 1160
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -105335.0 ( -71.85 by residue)
QMean score : 0.505
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