Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLANYTALCIDEFELDDPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVE--------GATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRL---VALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
| 3PM6 Chain:A ((10-302)) | LKSNRALPLLTFARTHSF-AIPAIC--VYNLEGILAIIRAAEHKRSPAMILLF-------------PWAIQYADSLLVRTAASACRAAS--------VPITLHLDHA---------------------------------------QDPEIIKRAADLSPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEA-------EPG-----------------------RIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGKAEFM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132686 for 2381 contacts (-55.7/contact) +
2D Compatibility (PS) -28536 + (NN) -3244 + (LL) 5312
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -163854.0 ( -68.82 by residue)
QMean score : 0.270
|
|
|